opt_utils.py

import numpy as np
import matplotlib.pyplot as plt
import h5py
import scipy.io
import sklearn
import sklearn.datasets

def sigmoid(x):
    """
    Compute the sigmoid of x

    Arguments:
    x -- A scalar or numpy array of any size.

    Return:
    s -- sigmoid(x)
    """
    s = 1/(1+np.exp(-x))
    return s

def relu(x):
    """
    Compute the relu of x

    Arguments:
    x -- A scalar or numpy array of any size.

    Return:
    s -- relu(x)
    """
    s = np.maximum(0,x)

    return s

def load_params_and_grads(seed=1):
    np.random.seed(seed)
    W1 = np.random.randn(2,3)
    b1 = np.random.randn(2,1)
    W2 = np.random.randn(3,3)
    b2 = np.random.randn(3,1)

    dW1 = np.random.randn(2,3)
    db1 = np.random.randn(2,1)
    dW2 = np.random.randn(3,3)
    db2 = np.random.randn(3,1)

    return W1, b1, W2, b2, dW1, db1, dW2, db2


def initialize_parameters(layer_dims):
    """
    Arguments:
    layer_dims -- python array (list) containing the dimensions of each layer in our network

    Returns:
    parameters -- python dictionary containing your parameters "W1", "b1", ..., "WL", "bL":
                    W1 -- weight matrix of shape (layer_dims[l], layer_dims[l-1])
                    b1 -- bias vector of shape (layer_dims[l], 1)
                    Wl -- weight matrix of shape (layer_dims[l-1], layer_dims[l])
                    bl -- bias vector of shape (1, layer_dims[l])

    Tips:
    - For example: the layer_dims for the "Planar Data classification model" would have been [2,2,1]. 
    This means W1's shape was (2,2), b1 was (1,2), W2 was (2,1) and b2 was (1,1). Now you have to generalize it!
    - In the for loop, use parameters['W' + str(l)] to access Wl, where l is the iterative integer.
    """

    np.random.seed(3)
    parameters = {}
    L = len(layer_dims) # number of layers in the network

    for l in range(1, L):
        parameters['W' + str(l)] = np.random.randn(layer_dims[l], layer_dims[l-1])*  np.sqrt(2 / layer_dims[l-1])
        parameters['b' + str(l)] = np.zeros((layer_dims[l], 1))

        assert(parameters['W' + str(l)].shape == layer_dims[l], layer_dims[l-1])
        assert(parameters['W' + str(l)].shape == layer_dims[l], 1)

    return parameters


def compute_cost(a3, Y):

    """
    Implement the cost function

    Arguments:
    a3 -- post-activation, output of forward propagation
    Y -- "true" labels vector, same shape as a3

    Returns:
    cost - value of the cost function
    """
    m = Y.shape[1]

    logprobs = np.multiply(-np.log(a3),Y) + np.multiply(-np.log(1 - a3), 1 - Y)
    cost = 1./m * np.sum(logprobs)

    return cost

def forward_propagation(X, parameters):
    """
    Implements the forward propagation (and computes the loss) presented in Figure 2.

    Arguments:
    X -- input dataset, of shape (input size, number of examples)
    parameters -- python dictionary containing your parameters "W1", "b1", "W2", "b2", "W3", "b3":
                    W1 -- weight matrix of shape ()
                    b1 -- bias vector of shape ()
                    W2 -- weight matrix of shape ()
                    b2 -- bias vector of shape ()
                    W3 -- weight matrix of shape ()
                    b3 -- bias vector of shape ()

    Returns:
    loss -- the loss function (vanilla logistic loss)
    """

    # retrieve parameters
    W1 = parameters["W1"]
    b1 = parameters["b1"]
    W2 = parameters["W2"]
    b2 = parameters["b2"]
    W3 = parameters["W3"]
    b3 = parameters["b3"]

    # LINEAR -> RELU -> LINEAR -> RELU -> LINEAR -> SIGMOID
    z1 = np.dot(W1, X) + b1
    a1 = relu(z1)
    z2 = np.dot(W2, a1) + b2
    a2 = relu(z2)
    z3 = np.dot(W3, a2) + b3
    a3 = sigmoid(z3)

    cache = (z1, a1, W1, b1, z2, a2, W2, b2, z3, a3, W3, b3)

    return a3, cache

def backward_propagation(X, Y, cache):
    """
    Implement the backward propagation presented in figure 2.

    Arguments:
    X -- input dataset, of shape (input size, number of examples)
    Y -- true "label" vector (containing 0 if cat, 1 if non-cat)
    cache -- cache output from forward_propagation()

    Returns:
    gradients -- A dictionary with the gradients with respect to each parameter, activation and pre-activation variables
    """
    m = X.shape[1]
    (z1, a1, W1, b1, z2, a2, W2, b2, z3, a3, W3, b3) = cache

    dz3 = 1./m * (a3 - Y)
    dW3 = np.dot(dz3, a2.T)
    db3 = np.sum(dz3, axis=1, keepdims = True)

    da2 = np.dot(W3.T, dz3)
    dz2 = np.multiply(da2, np.int64(a2 > 0))
    dW2 = np.dot(dz2, a1.T)
    db2 = np.sum(dz2, axis=1, keepdims = True)

    da1 = np.dot(W2.T, dz2)
    dz1 = np.multiply(da1, np.int64(a1 > 0))
    dW1 = np.dot(dz1, X.T)
    db1 = np.sum(dz1, axis=1, keepdims = True)

    gradients = {"dz3": dz3, "dW3": dW3, "db3": db3,
                 "da2": da2, "dz2": dz2, "dW2": dW2, "db2": db2,
                 "da1": da1, "dz1": dz1, "dW1": dW1, "db1": db1}

    return gradients

def predict(X, y, parameters):
    """
    This function is used to predict the results of a  n-layer neural network.

    Arguments:
    X -- data set of examples you would like to label
    parameters -- parameters of the trained model

    Returns:
    p -- predictions for the given dataset X
    """

    m = X.shape[1]
    p = np.zeros((1,m), dtype = np.int)

    # Forward propagation
    a3, caches = forward_propagation(X, parameters)

    # convert probas to 0/1 predictions
    for i in range(0, a3.shape[1]):
        if a3[0,i] > 0.5:
            p[0,i] = 1
        else:
            p[0,i] = 0

    # print results

    #print ("predictions: " + str(p[0,:]))
    #print ("true labels: " + str(y[0,:]))
    print("Accuracy: "  + str(np.mean((p[0,:] == y[0,:]))))

    return p

def load_2D_dataset():
    data = scipy.io.loadmat('datasets/data.mat')
    train_X = data['X'].T
    train_Y = data['y'].T
    test_X = data['Xval'].T
    test_Y = data['yval'].T

    plt.scatter(train_X[0, :], train_X[1, :], c=train_Y, s=40, cmap=plt.cm.Spectral);

    return train_X, train_Y, test_X, test_Y

def plot_decision_boundary(model, X, y):
    # Set min and max values and give it some padding
    x_min, x_max = X[0, :].min() - 1, X[0, :].max() + 1
    y_min, y_max = X[1, :].min() - 1, X[1, :].max() + 1
    h = 0.01
    # Generate a grid of points with distance h between them
    xx, yy = np.meshgrid(np.arange(x_min, x_max, h), np.arange(y_min, y_max, h))
    # Predict the function value for the whole grid
    Z = model(np.c_[xx.ravel(), yy.ravel()])
    Z = Z.reshape(xx.shape)
    # Plot the contour and training examples
    plt.contourf(xx, yy, Z, cmap=plt.cm.Spectral)
    plt.ylabel('x2')
    plt.xlabel('x1')
    plt.scatter(X[0, :], X[1, :], c=y, cmap=plt.cm.Spectral)
    plt.show()

def predict_dec(parameters, X):
    """
    Used for plotting decision boundary.

    Arguments:
    parameters -- python dictionary containing your parameters 
    X -- input data of size (m, K)

    Returns
    predictions -- vector of predictions of our model (red: 0 / blue: 1)
    """

    # Predict using forward propagation and a classification threshold of 0.5
    a3, cache = forward_propagation(X, parameters)
    predictions = (a3 > 0.5)
    return predictions

def load_dataset():
    np.random.seed(3)
    train_X, train_Y = sklearn.datasets.make_moons(n_samples=300, noise=.2) #300 #0.2 
    # Visualize the data
    plt.scatter(train_X[:, 0], train_X[:, 1], c=train_Y, s=40, cmap=plt.cm.Spectral);
    train_X = train_X.T
    train_Y = train_Y.reshape((1, train_Y.shape[0]))

    return train_X, train_Y